Gene: Lrriq3 ENSRNOG00000009555

Description

leucine-rich repeats and IQ motif containing 3 [Source:RGD Symbol;Acc:1591943]

Gene Synonyms

LOC499732, Lrrc44

Location

Primary_assembly 2: 246,778,984-246,880,668 forward strand.

GRCr8:CM070392.1

About this gene

This gene has 4 transcripts (splice variants), 147 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000012841.9	Lrriq3-201	2462	633aa	ENSRNOP00000012841.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HWR0 Q6AYL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000109356.2	Lrriq3-203	1903	299aa	ENSRNOP00000076522.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZK36 A6HWR2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000167705.1	Lrriq3-204	1898	604aa	ENSRNOP00000104135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000095686.2	Lrriq3-202	1037	344aa	ENSRNOP00000097180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6B5F4 A6HWR1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Lrriq3 ENSRNOG00000009555

Strains

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Gene: Lrriq3 ENSRNOG00000009555

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