Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
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External references
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Gene: Fbf1 ENSRNOG00000008577

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Description

Fas binding factor 1 [Source:RGD Symbol;Acc:1310662]

Gene Synonyms

LOC287836

Location

Primary_assembly 10: 101,874,664-101,900,738 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 143 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000102155.2	Fbf1-202	3823	1163aa	ENSRNOP00000092550.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AVT6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000151074.1	Fbf1-204	4013	1150aa	ENSRNOP00000099785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000116692.2	Fbf1-203	3911	1116aa	ENSRNOP00000096585.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQV1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000011560.10	Fbf1-201	3787	1151aa	ENSRNOP00000011560.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LSG3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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