Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Slc24a2 ENSRNOG00000008169

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Description

solute carrier family 24 member 2 [Source:RGD Symbol;Acc:628650]

Gene Synonyms

Nckx2

Location

Primary_assembly 5: 106,543,874-106,787,780 reverse strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants), 286 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000114418.2	Slc24a2-203	10574	671aa	ENSRNOP00000092960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000010827.8	Slc24a2-201	10571	670aa	ENSRNOP00000010827.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O54701-1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000083373.3	Slc24a2-202	10520	653aa	ENSRNOP00000074180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O54701-2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data