Summary
- Splice variants
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Gene: Tpx2 ENSRNOG00000008165

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Description

TPX2, microtubule nucleation factor [Source:RGD Symbol;Acc:1311894]

Gene Synonyms

LOC311546

Location

Primary_assembly 3: 161,778,742-161,820,724 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010851.7	Tpx2-201	2919	744aa	ENSRNOP00000010851.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KHR8 D3ZA78	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000088481.3	Tpx2-202	2823	737aa	ENSRNOP00000068619.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JT92	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000104440.2	Tpx2-203	2671	737aa	ENSRNOP00000097456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ARV3	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data