Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Cul5 ENSRNOG00000008039

.

Description

cullin 5 [Source:RGD Symbol;Acc:621742]

Gene Synonyms

CUL-5, VACM-1

Location

Primary_assembly 8: 62,912,193-62,965,463 reverse strand.

GRCr8:CM070398.1

About this gene

This gene has 4 transcripts (splice variants), 262 orthologues, 7 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010956.6	Cul5-201	2987	855aa	ENSRNOP00000010956.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0H2UHG3 A6J4J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000114900.2	Cul5-203	2906	828aa	ENSRNOP00000097338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASH3	-
ENSRNOT00000125969.1	Cul5-204	2793	791aa	ENSRNOP00000107439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099521.2	Cul5-202	2540	773aa	ENSRNOP00000089198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A7N3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data