Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ssb ENSRNOG00000007998

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Description

small RNA binding exonuclease protection factor La [Source:RGD Symbol;Acc:620804]

Gene Synonyms

MGC93380

Location

Primary_assembly 3: 75,024,474-75,034,031 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 2 transcripts (splice variants), 222 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000011174.7	Ssb-201	1697	415aa	ENSRNOP00000011175.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FK94 Q66HM7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000112148.2	Ssb-202	1446	377aa	ENSRNOP00000083561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZL0	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data