Gene: Fam13a ENSRNOG00000007947

Description

family with sequence similarity 13, member A [Source:RGD Symbol;Acc:1309807]

Gene Synonyms

Fam13a1, LOC362378, RGD1309807

Location

Primary_assembly 4: 89,388,569-89,485,988 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 6 transcripts (splice variants), 246 orthologues, 2 paralogues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000010898.9	Fam13a-201	2408	698aa	ENSRNOP00000010898.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZA02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000133594.1	Fam13a-205	2573	668aa	ENSRNOP00000102414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000112072.2	Fam13a-204	2417	673aa	ENSRNOP00000083611.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GAZ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098445.2	Fam13a-203	2306	664aa	ENSRNOP00000082991.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZUY8	-
ENSRNOT00000096994.2	Fam13a-202	2213	633aa	ENSRNOP00000083352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV98	-
ENSRNOT00000161367.1	Fam13a-206	2195	669aa	ENSRNOP00000110874.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-