Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Mcts2 ENSRNOG00000007738

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Description

MCTS family member 2 [Source:RGD Symbol;Acc:1591127]

Gene Synonyms

LOC689500

Location

Primary_assembly 3: 161,606,052-161,644,805 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 6 transcripts (splice variants), 207 orthologues, 4 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099070.2	Mcts2-204	1779	394aa	ENSRNOP00000086681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6G8 A6KHQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000010251.7	Mcts2-201	4997	378aa	ENSRNOP00000010251.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KHP9 D3ZP98	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095517.2	Mcts2-203	4973	370aa	ENSRNOP00000077139.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y7G8	-
ENSRNOT00000104940.2	Mcts2-205	4952	363aa	ENSRNOP00000076593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y910	-
ENSRNOT00000094861.2	Mcts2-202	1180	356aa	ENSRNOP00000091932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEK7	-
ENSRNOT00000107605.2	Mcts2-206	1144	344aa	ENSRNOP00000086628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A669	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data