Gene: Ift52 ENSRNOG00000007692

Description

intraflagellar transport 52 [Source:RGD Symbol;Acc:1311004]

Gene Synonyms

LOC362265, RGD1311004

Location

Primary_assembly 3: 172,092,017-172,116,493 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000066260.5	Ift52-201	2240	443aa	ENSRNOP00000059169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5T7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000113137.2	Ift52-203	2205	443aa	ENSRNOP00000076599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y075	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000078101.3	Ift52-202	2135	420aa	ENSRNOP00000071730.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K177	-