Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
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Phenotypes
Genetic Variation
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Gene: Zfp800 ENSRNOG00000007662

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Description

zinc finger protein 800 [Source:RGD Symbol;Acc:1560157]

Gene Synonyms

LOC500057, RGD1560157

Location

Primary_assembly 4: 57,767,506-57,814,209 reverse strand.

GRCr8:CM070394.1

About this gene

This gene has 2 transcripts (splice variants), 215 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087407.3	Zfp800-202	3217	717aa	ENSRNOP00000070530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JY61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000010223.8	Zfp800-201	2545	666aa	ENSRNOP00000010223.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZPQ4	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data