Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Kif3a ENSRNOG00000007515

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Description

kinesin family member 3a [Source:RGD Symbol;Acc:621536]

Location

Primary_assembly 10: 38,226,741-38,260,516 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues, 43 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110159.2	Kif3a-203	3310	720aa	ENSRNOP00000096291.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AP89	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000009999.9	Kif3a-201	2919	711aa	ENSRNOP00000009999.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQZ3	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000111035.2	Kif3a-204	2910	708aa	ENSRNOP00000096108.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL48	-
ENSRNOT00000077569.3	Kif3a-202	2888	686aa	ENSRNOP00000069057.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JUD6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data