Gene: Atg7 ENSRNOG00000007486

Description

autophagy related 7 [Source:RGD Symbol;Acc:1304817]

Gene Synonyms

Apg7l, LOC312647

Location

Primary_assembly 4: 149,391,390-149,598,319 forward strand.

GRCr8:CM070394.1

About this gene

This gene has 9 transcripts (splice variants), 197 orthologues, 12 paralogues and is associated with 33 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096019.2	Atg7-203	2741	740aa	ENSRNOP00000090070.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ABP9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000095118.2	Atg7-202	4502	697aa	ENSRNOP00000091366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJJ9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000129687.1	Atg7-208	3272	717aa	ENSRNOP00000111772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000150233.1	Atg7-209	3254	711aa	ENSRNOP00000103259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099380.2	Atg7-204	3175	706aa	ENSRNOP00000088044.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GGN5	-
ENSRNOT00000067532.4	Atg7-201	3083	695aa	ENSRNOP00000063617.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QWN0	-
ENSRNOT00000118521.2	Atg7-207	3017	703aa	ENSRNOP00000091824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGV7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000109260.2	Atg7-206	2988	671aa	ENSRNOP00000091777.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFU8	-
ENSRNOT00000104390.2	Atg7-205	2237	652aa	ENSRNOP00000079344.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G565	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Atg7 ENSRNOG00000007486

Strains

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Gene: Atg7 ENSRNOG00000007486

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