Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Pathway
Molecular interactions
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Gene: Cbll1 ENSRNOG00000007253

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Description

Cbl proto-oncogene like 1 [Source:RGD Symbol;Acc:1310703]

Gene Synonyms

LOC314028

Location

Primary_assembly 6: 53,798,712-53,813,880 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 4 transcripts (splice variants), 223 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000141682.1	Cbll1-204	4315	539aa	ENSRNOP00000100923.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000009566.6	Cbll1-201	4096	502aa	ENSRNOP00000009565.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZS02	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000102801.2	Cbll1-202	4045	488aa	ENSRNOP00000094608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJZ8 A6HB48	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000112474.2	Cbll1-203	1081	332aa	ENSRNOP00000084161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0P9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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