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Gene: Casp8ap2 ENSRNOG00000006487

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Description

caspase 8 associated protein 2 [Source:RGD Symbol;Acc:1305771]

Gene Synonyms

LOC313128

Location

Primary_assembly 5: 51,810,972-51,848,632 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 3 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000009228.8	Casp8ap2-201	6781	1962aa	ENSRNOP00000009227.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IIJ5 D4A7V6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000153566.1	Casp8ap2-203	5941	1918aa	ENSRNOP00000103253.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000101963.2	Casp8ap2-202	828	190aa	ENSRNOP00000085206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZN1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data