Gene: Pum2 ENSRNOG00000006180

Description

pumilio RNA-binding family member 2 [Source:RGD Symbol;Acc:1311024]

Gene Synonyms

LOC298874

Location

Primary_assembly 6: 37,182,013-37,262,223 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 5 transcripts (splice variants), 199 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000082598.3	Pum2-202	3913	1065aa	ENSRNOP00000074592.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8F9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000008359.8	Pum2-201	6091	1061aa	ENSRNOP00000008359.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HAM2 D3ZQL8	-
ENSRNOT00000095958.2	Pum2-203	5961	1042aa	ENSRNOP00000089681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AD36	-
ENSRNOT00000161902.1	Pum2-205	3820	986aa	ENSRNOP00000107432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000108134.2	Pum2-204	3384	930aa	ENSRNOP00000081323.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZSK1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,