Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mmp16 ENSRNOG00000005708

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Description

matrix metallopeptidase 16 [Source:RGD Symbol;Acc:620199]

Gene Synonyms

MMP-16, MT-MMP 3, MT3MMP, MTMMP3, Mt3-mmp

Location

Primary_assembly 5: 36,109,265-36,353,252 forward strand.

GRCr8:CM070395.1

About this gene

This gene has 1 transcript (splice variant), 268 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000050137.7	Mmp16-201	11414	607aa	ENSRNOP00000040229.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IIB9 F1M7F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data