Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Ncstn ENSRNOG00000005355

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Description

nicastrin [Source:RGD Symbol;Acc:631418]

Location

Primary_assembly 13: 87,062,831-87,078,839 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000008150.7	Ncstn-201	2887	708aa	ENSRNOP00000008150.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8CGU6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000109609.2	Ncstn-202	3002	615aa	ENSRNOP00000080989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DM90	-
ENSRNOT00000160006.1	Ncstn-203	380	62aa	ENSRNOP00000107739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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