Gene: Porcn ENSRNOG00000004819

Description

porcupine O-acyltransferase [Source:RGD Symbol;Acc:1564947]

Gene Synonyms

LOC317368, RGD1564947

Location

Primary_assembly X: 16,957,810-16,970,439 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 4 transcripts (splice variants), 264 orthologues, 5 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000106543.2	Porcn-203	1897	461aa	ENSRNOP00000076744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y6B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000118296.2	Porcn-204	1882	456aa	ENSRNOP00000087944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8A2 A6KP40	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000103450.2	Porcn-202	1879	455aa	ENSRNOP00000095116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APS0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000006491.9	Porcn-201	1836	450aa	ENSRNOP00000006491.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZVQ3	-