Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mta1 ENSRNOG00000004711

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Description

metastasis associated 1 [Source:RGD Symbol;Acc:621018]

Location

Primary_assembly 6: 137,999,915-138,038,696 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 6 transcripts (splice variants), 206 orthologues, 5 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000112035.2	Mta1-205	2756	742aa	ENSRNOP00000076373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XZU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000115942.2	Mta1-206	2790	719aa	ENSRNOP00000093477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AHP2	-
ENSRNOT00000006521.8	Mta1-201	2778	715aa	ENSRNOP00000006521.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TA98	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096549.2	Mta1-203	2742	703aa	ENSRNOP00000084698.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1S8 Q62599	-
ENSRNOT00000109546.2	Mta1-204	2732	732aa	ENSRNOP00000095736.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AM20	-
ENSRNOT00000046456.5	Mta1-202	2639	701aa	ENSRNOP00000051141.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQS1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data