Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Il1a ENSRNOG00000004575

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Description

interleukin 1 alpha [Source:RGD Symbol;Acc:2890]

Gene Synonyms

IL-1 alpha, IL-1F1

Location

Primary_assembly 3: 136,979,805-136,998,013 reverse strand.

GRCr8:CM070393.1

About this gene

This gene has 4 transcripts (splice variants), 91 orthologues and is associated with 116 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000131372.1	Il1a-204	2131	300aa	ENSRNOP00000107319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000006113.10	Il1a-201	1994	270aa	ENSRNOP00000006113.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LQB1 P16598	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000080818.3	Il1a-203	1933	270aa	ENSRNOP00000071252.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K003	-
ENSRNOT00000006126.9	Il1a-202	1820	212aa	ENSRNOP00000006126.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ESW2	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data