Gene: Fam117a ENSRNOG00000004417

Description

family with sequence similarity 117, member A [Source:RGD Symbol;Acc:1561062]

Gene Synonyms

LOC497983, RGD1561062

Location

GRCr8:CM070400.1

About this gene

This gene has 4 transcripts (splice variants), 260 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005939.7	Fam117a-201	2326	452aa	ENSRNOP00000005939.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2QC58 A6HI97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000148524.1	Fam117a-204	2523	428aa	ENSRNOP00000102541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000127117.1	Fam117a-202	2232	420aa	ENSRNOP00000101215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000139593.1	Fam117a-203	2062	314aa	ENSRNOP00000103651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6ID09	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.