Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pax6 ENSRNOG00000004410

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Description

paired box 6 [Source:RGD Symbol;Acc:3258]

Location

Primary_assembly 3: 112,590,391-112,611,763 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 3 transcripts (splice variants), 228 orthologues, 44 paralogues and is associated with 62 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000006302.9	Pax6-202	2408	439aa	ENSRNOP00000006302.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q206	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000089525.3	Pax6-203	2565	436aa	ENSRNOP00000071013.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P63016-2	-
ENSRNOT00000005882.7	Pax6-201	2523	422aa	ENSRNOP00000005882.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P63016-1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data