Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Lpin1 ENSRNOG00000004377

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Description

lipin 1 [Source:RGD Symbol;Acc:1307646]

Gene Synonyms

LOC313977

Location

Primary_assembly 6: 45,041,522-45,145,991 reverse strand.

GRCr8:CM070396.1

About this gene

This gene has 2 transcripts (splice variants), 272 orthologues, 3 paralogues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005863.8	Lpin1-201	3160	971aa	ENSRNOP00000005863.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FDH2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000114735.2	Lpin1-202	3114	940aa	ENSRNOP00000080344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPU6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data