Gene: Cobl ENSRNOG00000004281

Description

cordon-bleu WH2 repeat protein [Source:RGD Symbol;Acc:1312002]

Gene Synonyms

LOC305497

Location

Primary_assembly 14: 91,041,721-91,274,257 reverse strand.

GRCr8:CM070404.1

About this gene

This gene has 8 transcripts (splice variants), 207 orthologues, 1 paralogue and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086154.3	Cobl-202	4364	1378aa	ENSRNOP00000072330.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2Q1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000105473.2	Cobl-204	5679	1341aa	ENSRNOP00000097856.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ASN2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000110506.2	Cobl-205	5560	1320aa	ENSRNOP00000091350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEB0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000064483.3	Cobl-201	5455	1285aa	ENSRNOP00000063258.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZUI5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000135785.1	Cobl-207	5377	1259aa	ENSRNOP00000107957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000115686.2	Cobl-206	3740	1170aa	ENSRNOP00000082660.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZV00	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000141519.1	Cobl-208	1621	404aa	ENSRNOP00000102446.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000094227.2	Cobl-203	1277	349aa	ENSRNOP00000093905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AJQ5	-