Gene: Rims2 ENSRNOG00000004201

Description

regulating synaptic membrane exocytosis 2 [Source:RGD Symbol;Acc:620001]

Gene Synonyms

LOC103692905, Nim2, RIM 2, Rim2

Location

Primary_assembly 7: 72,133,170-72,645,499 forward strand.

GRCr8:CM070397.1

About this gene

This gene has 10 transcripts (splice variants), 237 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000039984.7	Rims2-202	5690	1572aa	ENSRNOP00000047914.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096P6M8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000106052.2	Rims2-205	5751	1543aa	ENSRNOP00000087824.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6L6	-
ENSRNOT00000116297.2	Rims2-207	5712	1530aa	ENSRNOP00000079853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZP02	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000050753.6	Rims2-204	5642	1556aa	ENSRNOP00000043010.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNC5	-
ENSRNOT00000125675.1	Rims2-209	5510	1512aa	ENSRNOP00000112340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000043079.6	Rims2-203	5495	1524aa	ENSRNOP00000045165.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096P6M3	-
ENSRNOT00000112311.2	Rims2-206	5495	1507aa	ENSRNOP00000083681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVS6	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000167561.1	Rims2-210	5463	1447aa	ENSRNOP00000102905.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000006393.6	Rims2-201	5313	1397aa	ENSRNOP00000006393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9JIS1-10	-
ENSRNOT00000124088.1	Rims2-208	5217	1511aa	ENSRNOP00000112184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Rims2 ENSRNOG00000004201

Strains

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Gene: Rims2 ENSRNOG00000004201

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