Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Spata7 ENSRNOG00000003955

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Description

spermatogenesis associated 7 [Source:RGD Symbol;Acc:621010]

Gene Synonyms

RSD-3, Wmp1

Location

Primary_assembly 6: 123,609,535-123,655,001 forward strand.

GRCr8:CM070396.1

About this gene

This gene has 9 transcripts (splice variants), 185 orthologues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005297.8	Spata7-201	2086	596aa	ENSRNOP00000005297.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LP56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000097471.2	Spata7-203	2041	581aa	ENSRNOP00000091876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACK6	-
ENSRNOT00000108318.2	Spata7-207	2002	539aa	ENSRNOP00000094270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AZX0	-
ENSRNOT00000105094.2	Spata7-206	1943	552aa	ENSRNOP00000084351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GBQ8	-
ENSRNOT00000104996.2	Spata7-205	1928	545aa	ENSRNOP00000091805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACS9	-
ENSRNOT00000098377.2	Spata7-204	1711	520aa	ENSRNOP00000093644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKR6	-
ENSRNOT00000156669.1	Spata7-209	1666	504aa	ENSRNOP00000108037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000118680.2	Spata7-208	1640	499aa	ENSRNOP00000085724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZV7	-
ENSRNOT00000096420.2	Spata7-202	1525	409aa	ENSRNOP00000096066.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQC2	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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