Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Sod3 ENSRNOG00000003869

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Description

superoxide dismutase 3 [Source:RGD Symbol;Acc:3733]

Gene Synonyms

EC-SOD

Location

Primary_assembly 14: 62,811,177-62,829,125 reverse strand.

GRCr8:CM070404.1

About this gene

This gene has 5 transcripts (splice variants), 186 orthologues, 2 paralogues and is associated with 49 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000158055.1	Sod3-205	13624	244aa	ENSRNOP00000101578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJH8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000123334.1	Sod3-202	10910	244aa	ENSRNOP00000098721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJH8	-
ENSRNOT00000150416.1	Sod3-204	6486	244aa	ENSRNOP00000107294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJH8	-
ENSRNOT00000147562.1	Sod3-203	4427	244aa	ENSRNOP00000100415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJH8	-
ENSRNOT00000005155.5	Sod3-201	4151	244aa	ENSRNOP00000005155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IJH8 Q08420	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data