Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Prox1 ENSRNOG00000003694

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Description

prospero homeobox 1 [Source:RGD Symbol;Acc:1306890]

Location

Primary_assembly 13: 104,200,378-104,250,975 reverse strand.

GRCr8:CM070403.1

About this gene

This gene has 2 transcripts (splice variants), 267 orthologues, 1 paralogue and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000096982.2	Prox1-202	3329	628aa	ENSRNOP00000088774.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8R7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000004905.7	Prox1-201	4129	583aa	ENSRNOP00000004905.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6JGW7 D3ZU00	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data