Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: 4933400A11Rik ENSRNOG00000003688

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Description

similar to RIKEN cDNA 4933400A11 [Source:RGD Symbol;Acc:15003266]

Location

Primary_assembly X: 27,950,539-27,955,623 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 5 transcripts (splice variants), 112 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000164680.1	4933400A11Rik-204	1926	300aa	ENSRNOP00000100837.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2D9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000163149.1	4933400A11Rik-203	1900	300aa	ENSRNOP00000107339.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2D9	-
ENSRNOT00000167357.1	4933400A11Rik-205	1867	300aa	ENSRNOP00000108730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2D9	-
ENSRNOT00000141153.1	4933400A11Rik-202	1829	300aa	ENSRNOP00000112101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2D9	-
ENSRNOT00000004893.6	4933400A11Rik-201	1662	300aa	ENSRNOP00000004893.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K2D9 D3ZVN8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data