Summary
- Splice variants
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Sequence
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Comparative Genomics
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Phenotypes
Genetic Variation
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Gene: Nup85 ENSRNOG00000003673

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Description

nucleoporin 85 [Source:RGD Symbol;Acc:1311942]

Gene Synonyms

LOC287830, Pcnt1

Location

Primary_assembly 10: 101,305,390-101,324,641 forward strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 214 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000142660.1	Nup85-204	3061	663aa	ENSRNOP00000111854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000005035.9	Nup85-201	2200	634aa	ENSRNOP00000005035.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4QQS8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101986.2	Nup85-203	2107	634aa	ENSRNOP00000080318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPV6	-
ENSRNOT00000149257.1	Nup85-205	2089	628aa	ENSRNOP00000107531.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099013.2	Nup85-202	1981	592aa	ENSRNOP00000093249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GKK7	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data