Gene: Mcf2 ENSRNOG00000003435

Description

MCF.2 cell line derived transforming sequence [Source:RGD Symbol;Acc:1566098]

Gene Synonyms

LOC102555789, LOC317598, RGD1566098

Location

Primary_assembly X: 143,444,038-143,567,714 reverse strand.

GRCr8:CM070411.1

About this gene

This gene has 9 transcripts (splice variants), 266 orthologues, 22 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000152679.1	Mcf2-206	4606	1203aa	ENSRNOP00000101006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000172567.1	Mcf2-209	4558	1187aa	ENSRNOP00000110320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000097818.2	Mcf2-202	4332	1110aa	ENSRNOP00000089925.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A9Q4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000161687.1	Mcf2-207	4089	1080aa	ENSRNOP00000109227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000051550.7	Mcf2-201	4001	1180aa	ENSRNOP00000050503.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LUS8	-
ENSRNOT00000170176.1	Mcf2-208	3924	1025aa	ENSRNOP00000109397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000117247.2	Mcf2-203	3913	942aa	ENSRNOP00000077277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y7L9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000123391.1	Mcf2-204	3742	996aa	ENSRNOP00000111423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000144403.1	Mcf2-205	3736	1122aa	ENSRNOP00000100280.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-