Summary
- Splice variants
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- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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- GO: Anatomical entity
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Gene: Slc35f5 ENSRNOG00000003403

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Description

solute carrier family 35, member F5 [Source:RGD Symbol;Acc:1308125]

Gene Synonyms

LOC288993

Location

Primary_assembly 13: 39,544,757-39,581,223 forward strand.

GRCr8:CM070403.1

About this gene

This gene has 6 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094536.2	Slc35f5-202	2631	546aa	ENSRNOP00000079551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G3G3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000004581.7	Slc35f5-201	2785	524aa	ENSRNOP00000004581.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K821 D3ZT80	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000142436.1	Slc35f5-206	2732	532aa	ENSRNOP00000102521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000098086.2	Slc35f5-203	2680	489aa	ENSRNOP00000080120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G454	-
ENSRNOT00000125307.1	Slc35f5-205	2641	476aa	ENSRNOP00000104643.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000118661.2	Slc35f5-204	2627	503aa	ENSRNOP00000090608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ANK8	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data