Gene: Clcn5 ENSRNOG00000002862

Description

chloride voltage-gated channel 5 [Source:RGD Symbol;Acc:2362]

Gene Synonyms

CLC5, clC-5

Location

Primary_assembly X: 17,857,260-18,011,844 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 5 transcripts (splice variants), 225 orthologues, 8 paralogues and is associated with 24 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000079054.3	Clcn5-202	8630	828aa	ENSRNOP00000074459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51796-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000168934.1	Clcn5-205	8662	816aa	ENSRNOP00000100084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000142620.1	Clcn5-204	8597	822aa	ENSRNOP00000099907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000099230.2	Clcn5-203	8301	813aa	ENSRNOP00000083323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVV0	-
ENSRNOT00000003895.8	Clcn5-201	8272	764aa	ENSRNOP00000003895.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P51796-2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,