Gene: Luc7l3-ps2 ENSRNOG00000002835

Description

LUC7-like 3 pre-mRNA splicing factor, pseudogene 2 [Source:RGD Symbol;Acc:1584099]

Gene Synonyms

LOC688867

Location

Primary_assembly 10: 79,736,853-79,773,429 reverse strand.

GRCr8:CM070400.1

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000003914.8	Luc7l3-ps2-201	3331	491aa	ENSRNOP00000003914.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6HI41 D3ZFB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000152566.1	Luc7l3-ps2-205	3404	432aa	ENSRNOP00000109908.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000107077.2	Luc7l3-ps2-203	3295	479aa	ENSRNOP00000083384.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZVZ0	-
ENSRNOT00000101307.2	Luc7l3-ps2-202	2602	477aa	ENSRNOP00000091946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AUY1	-
ENSRNOT00000111455.2	Luc7l3-ps2-204	1618	469aa	ENSRNOP00000092560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AE53	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,