Gene: Tceal1 ENSRNOG00000002387

Description

transcription elongation factor A like 1 [Source:RGD Symbol;Acc:1549724]

Gene Synonyms

MGC105656

Location

Primary_assembly X: 104,850,136-104,853,085 forward strand.

GRCr8:CM070411.1

About this gene

This gene has 3 transcripts (splice variants), 82 orthologues, 6 paralogues and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000104212.2	Tceal1-203	1445	229aa	ENSRNOP00000076536.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y049	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000044372.5	Tceal1-201	1612	165aa	ENSRNOP00000049958.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KNT1 Q5PPP3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000103148.2	Tceal1-202	1399	165aa	ENSRNOP00000087064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6KNT1 Q5PPP3	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,