Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Bbx ENSRNOG00000001971

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Description

BBX high mobility group box domain containing [Source:RGD Symbol;Acc:1309769]

Gene Synonyms

LOC100912484, LOC303970

Location

Primary_assembly 11: 63,850,018-64,093,265 forward strand.

GRCr8:CM070401.1

About this gene

This gene has 5 transcripts (splice variants), 196 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000119965.2	Bbx-205	4295	1031aa	ENSRNOP00000080973.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRG6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000119802.2	Bbx-204	3087	870aa	ENSRNOP00000089981.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADK4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000002700.8	Bbx-201	2972	911aa	ENSRNOP00000002700.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1L1L0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000083438.3	Bbx-202	2903	888aa	ENSRNOP00000070428.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JXW5	-
ENSRNOT00000103253.2	Bbx-203	2531	830aa	ENSRNOP00000086952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2A9	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data