Gene: Arvcf ENSRNOG00000001888

Description

ARVCF, delta catenin family member [Source:RGD Symbol;Acc:1306655]

Gene Synonyms

LOC303798, MGC188400

Location

Primary_assembly 11: 96,092,451-96,150,163 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 4 transcripts (splice variants), 278 orthologues, 6 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000117187.2	Arvcf-204	3441	1050aa	ENSRNOP00000079572.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZNA5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000044635.7	Arvcf-201	3804	973aa	ENSRNOP00000047113.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F7F3 F7FK74	-
ENSRNOT00000115091.2	Arvcf-203	3536	909aa	ENSRNOP00000092142.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADG5	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000108636.2	Arvcf-202	3198	962aa	ENSRNOP00000076401.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y059 A6JSG8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,