Gene: Vps8 ENSRNOG00000001764

Description

VPS8 subunit of CORVET complex [Source:RGD Symbol;Acc:1309443]

Gene Synonyms

LOC287990, RGD1309443

Location

Primary_assembly 11: 92,906,700-93,138,570 reverse strand.

GRCr8:CM070401.1

About this gene

This gene has 6 transcripts (splice variants), 223 orthologues, 2 paralogues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110575.2	Vps8-202	4846	1431aa	ENSRNOP00000077953.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5XWN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000029255.9	Vps8-201	4841	1430aa	ENSRNOP00000030100.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5F7	-
ENSRNOT00000157844.1	Vps8-206	4781	1410aa	ENSRNOP00000105239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000125353.1	Vps8-204	4778	1409aa	ENSRNOP00000100644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000120068.2	Vps8-203	4751	1400aa	ENSRNOP00000092143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AEY8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000145153.1	Vps8-205	4568	1339aa	ENSRNOP00000108740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-