Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Mtx2 ENSRNOG00000001559

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Description

metaxin 2 [Source:RGD Symbol;Acc:1306473]

Gene Synonyms

LOC288150, MGC106000

Location

Primary_assembly 3: 80,137,581-80,271,684 forward strand.

GRCr8:CM070393.1

About this gene

This gene has 6 transcripts (splice variants), 203 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095215.2	Mtx2-202	1223	312aa	ENSRNOP00000082118.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZX94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000141147.1	Mtx2-206	1918	260aa	ENSRNOP00000104904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000097910.2	Mtx2-204	1127	258aa	ENSRNOP00000084209.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A0S6	-
ENSRNOT00000097639.2	Mtx2-203	1098	242aa	ENSRNOP00000095766.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6APV3	-
ENSRNOT00000115991.2	Mtx2-205	1069	260aa	ENSRNOP00000078996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLV1	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSRNOT00000002134.7	Mtx2-201	984	271aa	ENSRNOP00000002134.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U1Z9	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data