Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
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- Gene history

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Gene: Vgf ENSRNOG00000001416

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Description

VGF nerve growth factor inducible [Source:RGD Symbol;Acc:69399]

Gene Synonyms

LOC100909521

Location

Primary_assembly 12: 25,273,333-25,282,703 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 10 transcripts (splice variants), 72 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000172822.1	Vgf-210	4988	709aa	ENSRNOP00000107364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000130466.1	Vgf-202	4944	617aa	ENSRNOP00000110481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000144947.1	Vgf-204	4756	617aa	ENSRNOP00000102858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000169093.1	Vgf-207	4423	617aa	ENSRNOP00000105210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000147010.1	Vgf-205	3954	617aa	ENSRNOP00000099107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000171607.1	Vgf-209	3654	617aa	ENSRNOP00000109724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000140575.1	Vgf-203	3480	617aa	ENSRNOP00000109676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000170533.1	Vgf-208	3407	617aa	ENSRNOP00000104007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-
ENSRNOT00000041808.4	Vgf-201	3151	617aa	ENSRNOP00000050024.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052 F1LP80 P20156	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000155118.1	Vgf-206	3076	617aa	ENSRNOP00000104281.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6J052	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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