Gene: Rrp1 ENSRNOG00000001203

Description

ribosomal RNA processing 1 [Source:RGD Symbol;Acc:1307286]

Gene Synonyms

LOC102553324, LOC309674, Nnp1

Location

Primary_assembly 20: 10,260,592-10,275,076 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues, 1 paralogue and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000001597.9	Rrp1-201	5026	443aa	ENSRNOP00000001597.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5M9F3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000119562.2	Rrp1-203	4972	425aa	ENSRNOP00000086134.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1L6	-
ENSRNOT00000116425.2	Rrp1-202	4966	423aa	ENSRNOP00000092632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6GJW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,