Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Tesc ENSRNOG00000001128

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Description

tescalcin [Source:RGD Symbol;Acc:1566317]

Gene Synonyms

LOC288689, RGD1566317

Location

Primary_assembly 12: 44,181,659-44,216,722 reverse strand.

GRCr8:CM070402.1

About this gene

This gene has 7 transcripts (splice variants), 277 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000130447.1	Tesc-205	1190	312aa	ENSRNOP00000101666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000148974.1	Tesc-207	1440	202aa	ENSRNOP00000099700.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000094481.2	Tesc-202	1415	255aa	ENSRNOP00000078044.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9W2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000133241.1	Tesc-206	1311	303aa	ENSRNOP00000107159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000114089.2	Tesc-204	1110	248aa	ENSRNOP00000088101.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A929	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000104891.2	Tesc-203	1054	247aa	ENSRNOP00000092418.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AI44	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000001490.8	Tesc-201	877	204aa	ENSRNOP00000001490.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZTN1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data