Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Pdap1 ENSRNOG00000000990

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Description

PDGFA associated protein 1 [Source:RGD Symbol;Acc:620442]

Gene Synonyms

Haspp28, PAP, PAP1

Location

Primary_assembly 12: 14,584,398-14,594,641 forward strand.

GRCr8:CM070402.1

About this gene

This gene has 3 transcripts (splice variants), 202 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097544.2	Pdap1-202	1371	240aa	ENSRNOP00000085448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A1E1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000001310.9	Pdap1-201	1236	181aa	ENSRNOP00000001310.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6K1F8 Q62785	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000100938.2	Pdap1-203	1191	180aa	ENSRNOP00000096235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AQE8	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data