Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
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Gene: Bag6 ENSRNOG00000000851

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Description

BAG cochaperone 6 [Source:RGD Symbol;Acc:71064]

Gene Synonyms

Bat3

Location

Primary_assembly 20: 3,680,607-3,693,329 reverse strand.

GRCr8:CM070410.1

About this gene

This gene has 4 transcripts (splice variants), 239 orthologues and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000085598.4	Bag6-203	3733	1219aa	ENSRNOP00000074143.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000060832.5	Bag6-202	3882	1182aa	ENSRNOP00000057557.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QS48	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000001129.6	Bag6-201	3735	1133aa	ENSRNOP00000001129.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2PYQ1	-
ENSRNOT00000097591.2	Bag6-204	3625	1183aa	ENSRNOP00000090281.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADC3 A6KTV0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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