Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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Gene: Atg5 ENSRNOG00000000322

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Description

autophagy related 5 [Source:RGD Symbol;Acc:1359580]

Gene Synonyms

LOC365601

Location

Primary_assembly 20: 49,380,813-49,471,821 forward strand.

GRCr8:CM070410.1

About this gene

This gene has 4 transcripts (splice variants), 210 orthologues and is associated with 17 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000080283.3	Atg5-202	2423	275aa	ENSRNOP00000075339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2KAB9 A6K6V9 Q3MQ06	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000101057.2	Atg5-203	2324	217aa	ENSRNOP00000086278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5XIS0	-
ENSRNOT00000133750.1	Atg5-204	2273	171aa	ENSRNOP00000107876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000057078.6	Atg5-201	1976	257aa	ENSRNOP00000053910.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZJZ1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data