Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cdo1 ENSRNOG00000000158

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Description

cysteine dioxygenase type 1 [Source:RGD Symbol;Acc:69262]

Gene Synonyms

CDO, CDO-I

Location

Primary_assembly 18: 41,619,070-41,633,891 reverse strand.

GRCr8:CM070408.1

About this gene

This gene has 4 transcripts (splice variants), 204 orthologues and is associated with 8 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000000172.7	Cdo1-201	1457	200aa	ENSRNOP00000000172.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6IWW6 P21816	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000161467.1	Cdo1-204	1920	185aa	ENSRNOP00000099930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSRNOT00000096478.2	Cdo1-202	1395	174aa	ENSRNOP00000079228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMI6	-
ENSRNOT00000107879.2	Cdo1-203	955	197aa	ENSRNOP00000077468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZKB1	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data