Gene: Smarca5 ENSRNOG00000018149

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:RGD Symbol;Acc:1308832]

Gene Synonyms

LOC307766

Location

mRatBN7.2:CM026992.1

About this gene

This gene has 2 transcripts (splice variants), 162 orthologues, 32 paralogues and is associated with 4 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000095459.1	Smarca5-202	4938	1051aa	ENSRNOP00000080637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZQQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000024568.6	Smarca5-201	4123	995aa	ENSRNOP00000024568.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LNL2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,