Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: plod1a ENSPNAG00000004781

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Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Ensembl NN prediction with score 99.99%]

Location

Primary_assembly 29: 13,969,520-13,985,879 reverse strand.

fPygNat1.pri:CM026749.1

About this gene

This gene has 10 transcripts (splice variants), 197 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPNAT00000046526.1	plod1a-205	2790	746aa	ENSPNAP00000082244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPNAT00000052924.1	plod1a-210	2969	734aa	ENSPNAP00000046258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000039976.2	plod1a-209	2966	733aa	ENSPNAP00000020359.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B4DBN8	-
ENSPNAT00000047857.1	plod1a-208	2798	677aa	ENSPNAP00000043038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000080149.1	plod1a-203	2778	742aa	ENSPNAP00000066966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000067114.1	plod1a-204	2733	727aa	ENSPNAP00000045964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000050368.1	plod1a-202	2733	727aa	ENSPNAP00000071853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000057718.1	plod1a-206	2694	714aa	ENSPNAP00000049796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000060243.1	plod1a-207	2688	712aa	ENSPNAP00000069845.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSPNAT00000082457.1	plod1a-201	2655	701aa	ENSPNAP00000075834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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