Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: vps39 ENSPFOG00000005574

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Description

VPS39 subunit of HOPS complex [Source:ZFIN;Acc:ZDB-GENE-080530-2]

Location

Scaffold KI519851.1: 258,419-281,496 reverse strand.

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPFOT00000005780.2	vps39-202	3485	849aa	ENSPFOP00000005771.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087XJ18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSPFOT00000027491.1	vps39-201	5793	872aa	ENSPFOP00000023143.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096LVF2	-

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Summary

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