Transcript: ENSPTRT00000043402.4 SNX9-201

Description

sorting nexin 9 [Source:VGNC Symbol;Acc:VGNC:3707]

Location

About this transcript

This transcript has 18 exons, is annotated with 27 domains and features and maps to 626 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000103336.1	SNX9-202	1791	596aa	ENSPTRP00000065813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3RM97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000043402.4	SNX9-201	3744	595aa	ENSPTRP00000042696.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2VYL6 H2R1Q2	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,744 bps, Translation length: 595 residues

Version

ENSPTRT00000043402.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.